Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SSR4P51571 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 ELK1P1-201ENST00000485699 580 ntBASIC14.49□□□□□ -0.09
SSR4P51571 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SSR4P51571 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SSR4P51571 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.49□□□□□ -0.09
SSR4P51571 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.49□□□□□ -0.09
SSR4P51571 TMEM261P1-201ENST00000604899 340 ntBASIC14.49□□□□□ -0.09
SSR4P51571 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR4P51571 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SSR4P51571 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.49□□□□□ -0.09
SSR4P51571 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSR4P51571 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.49□□□□□ -0.09
SSR4P51571 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SSR4P51571 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
SSR4P51571 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SSR4P51571 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SSR4P51571 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.48□□□□□ -0.09
SSR4P51571 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SSR4P51571 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
SSR4P51571 AC098850.1-201ENST00000419919 790 ntBASIC14.48□□□□□ -0.09
SSR4P51571 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.48□□□□□ -0.09
SSR4P51571 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 KRT18P43-201ENST00000469825 1281 ntBASIC14.48□□□□□ -0.09
SSR4P51571 FAM86LP-201ENST00000478302 853 ntBASIC14.48□□□□□ -0.09
SSR4P51571 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.48□□□□□ -0.09
SSR4P51571 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.48□□□□□ -0.09
SSR4P51571 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 AL391069.4-201ENST00000609583 481 ntBASIC14.48□□□□□ -0.09
SSR4P51571 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SSR4P51571 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 AL603832.2-201ENST00000566195 2125 ntBASIC14.48□□□□□ -0.09
SSR4P51571 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
SSR4P51571 AC112504.1-201ENST00000623415 1841 ntBASIC14.48□□□□□ -0.09
SSR4P51571 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SSR4P51571 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.47□□□□□ -0.09
SSR4P51571 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SSR4P51571 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms