Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
BRCC3P46736 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.76■□□□□ 0.27
BRCC3P46736 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.76■□□□□ 0.27
BRCC3P46736 TDH-203ENST00000531764 1110 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.76■□□□□ 0.27
BRCC3P46736 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.76■□□□□ 0.27
BRCC3P46736 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.76■□□□□ 0.27
BRCC3P46736 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
BRCC3P46736 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.76■□□□□ 0.27
BRCC3P46736 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.76■□□□□ 0.27
BRCC3P46736 AL118508.1-201ENST00000613502 2345 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 AC010491.1-201ENST00000563101 2797 ntBASIC16.76■□□□□ 0.27
BRCC3P46736 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BRCC3P46736 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BRCC3P46736 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BRCC3P46736 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 AL603832.2-201ENST00000566195 2125 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.75■□□□□ 0.27
BRCC3P46736 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BRCC3P46736 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.75■□□□□ 0.27
BRCC3P46736 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
BRCC3P46736 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.75■□□□□ 0.27
BRCC3P46736 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.75■□□□□ 0.27
BRCC3P46736 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.75■□□□□ 0.27
BRCC3P46736 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.75■□□□□ 0.27
BRCC3P46736 SNX29P1-201ENST00000548357 1007 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 MIR4259-201ENST00000584466 101 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 BTNL10-201ENST00000595971 695 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.75■□□□□ 0.27
BRCC3P46736 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 CYP2T1P-202ENST00000641596 2535 ntBASIC16.75■□□□□ 0.27
BRCC3P46736 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.75■□□□□ 0.27
BRCC3P46736 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
BRCC3P46736 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
BRCC3P46736 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BRCC3P46736 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
BRCC3P46736 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
BRCC3P46736 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BRCC3P46736 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 SOCS2P1-201ENST00000417727 557 ntBASIC16.74■□□□□ 0.27
BRCC3P46736 ACTG1P3-201ENST00000431775 1114 ntBASIC16.74■□□□□ 0.27
BRCC3P46736 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.74■□□□□ 0.27
BRCC3P46736 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 RPL13AP25-201ENST00000484130 612 ntBASIC16.74■□□□□ 0.27
BRCC3P46736 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 SLC25A47P1-201ENST00000531577 414 ntBASIC16.74■□□□□ 0.27
BRCC3P46736 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.74■□□□□ 0.27
BRCC3P46736 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BRCC3P46736 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.74■□□□□ 0.27
BRCC3P46736 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.74■□□□□ 0.27
BRCC3P46736 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 AC018665.1-201ENST00000622927 1362 ntBASIC16.74■□□□□ 0.27
BRCC3P46736 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BRCC3P46736 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRCC3P46736 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.74■□□□□ 0.27
BRCC3P46736 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BRCC3P46736 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
BRCC3P46736 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms