Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 CYP2T1P-202ENST00000641596 2535 ntBASIC13.62□□□□□ -0.23
CD40P25942 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD40P25942 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 CDC14C-201ENST00000428251 1719 ntBASIC13.62□□□□□ -0.23
CD40P25942 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40P25942 FAM86LP-201ENST00000478302 853 ntBASIC13.62□□□□□ -0.23
CD40P25942 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40P25942 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.62□□□□□ -0.23
CD40P25942 WFDC1-204ENST00000613603 549 ntBASIC13.62□□□□□ -0.23
CD40P25942 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD40P25942 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CD40P25942 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD40P25942 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CD40P25942 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD40P25942 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CD40P25942 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 AC084018.2-201ENST00000613093 2607 ntBASIC13.61□□□□□ -0.23
CD40P25942 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 LINC02447-202ENST00000501888 2146 ntBASIC13.61□□□□□ -0.23
CD40P25942 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 GK-202ENST00000378941 458 ntTSL 3 BASIC13.61□□□□□ -0.23
CD40P25942 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.61□□□□□ -0.23
CD40P25942 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.61□□□□□ -0.23
CD40P25942 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 GIMAP3P-201ENST00000495150 836 ntBASIC13.61□□□□□ -0.23
CD40P25942 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.61□□□□□ -0.23
CD40P25942 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.61□□□□□ -0.23
CD40P25942 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.61□□□□□ -0.23
CD40P25942 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.61□□□□□ -0.23
CD40P25942 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD40P25942 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
CD40P25942 AC132938.2-201ENST00000579188 680 ntBASIC13.61□□□□□ -0.23
CD40P25942 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.61□□□□□ -0.23
CD40P25942 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms