Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.47□□□□□ -0.09
CD53P19397 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.47□□□□□ -0.09
CD53P19397 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 AL161645.1-201ENST00000622716 1255 ntBASIC14.47□□□□□ -0.09
CD53P19397 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CD53P19397 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 PRAL-201ENST00000624952 3286 ntBASIC14.47□□□□□ -0.09
CD53P19397 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.47□□□□□ -0.09
CD53P19397 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD53P19397 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD53P19397 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 U82695.1-201ENST00000635752 1889 ntBASIC14.46□□□□□ -0.09
CD53P19397 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 SLC22A20-204ENST00000530038 1673 ntBASIC14.46□□□□□ -0.09
CD53P19397 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 HCG4-201ENST00000418983 998 ntBASIC14.46□□□□□ -0.09
CD53P19397 TREML5P-201ENST00000421694 576 ntBASIC14.46□□□□□ -0.09
CD53P19397 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.46□□□□□ -0.09
CD53P19397 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 IGHV3-62-201ENST00000520057 340 ntBASIC14.46□□□□□ -0.09
CD53P19397 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.46□□□□□ -0.09
CD53P19397 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.46□□□□□ -0.09
CD53P19397 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.46□□□□□ -0.09
CD53P19397 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.46□□□□□ -0.09
CD53P19397 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CD53P19397 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD53P19397 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD53P19397 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD53P19397 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD53P19397 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.46□□□□□ -0.1
CD53P19397 AC005622.1-201ENST00000636801 1703 ntBASIC14.46□□□□□ -0.1
CD53P19397 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
CD53P19397 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.46□□□□□ -0.1
CD53P19397 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CD53P19397 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD53P19397 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD53P19397 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.46□□□□□ -0.1
CD53P19397 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD53P19397 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CD53P19397 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 GK-202ENST00000378941 458 ntTSL 3 BASIC14.45□□□□□ -0.1
CD53P19397 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD53P19397 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.45□□□□□ -0.1
CD53P19397 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CD53P19397 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms