Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TMEM14DP-201ENST00000422205 345 ntBASIC12.4□□□□□ -0.42
CD28P10747 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 AC245100.5-201ENST00000452108 331 ntBASIC12.4□□□□□ -0.42
CD28P10747 ACA64.2-201ENST00000459014 129 ntBASIC12.4□□□□□ -0.42
CD28P10747 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.4□□□□□ -0.42
CD28P10747 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.4□□□□□ -0.42
CD28P10747 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.4□□□□□ -0.42
CD28P10747 RRP7BP-205ENST00000566851 833 ntBASIC12.4□□□□□ -0.42
CD28P10747 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.4□□□□□ -0.42
CD28P10747 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
CD28P10747 TMEM261P1-201ENST00000604899 340 ntBASIC12.4□□□□□ -0.42
CD28P10747 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 PCDHA14-201ENST00000506751 2298 ntBASIC12.4□□□□□ -0.42
CD28P10747 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.4□□□□□ -0.42
CD28P10747 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.4□□□□□ -0.42
CD28P10747 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD28P10747 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
CD28P10747 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.4□□□□□ -0.43
CD28P10747 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CD28P10747 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
CD28P10747 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 BNIP3P1-202ENST00000550043 1585 ntBASIC12.39□□□□□ -0.43
CD28P10747 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 AC079776.1-201ENST00000401540 1152 ntBASIC12.39□□□□□ -0.43
CD28P10747 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.39□□□□□ -0.43
CD28P10747 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.39□□□□□ -0.43
CD28P10747 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.39□□□□□ -0.43
CD28P10747 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.39□□□□□ -0.43
CD28P10747 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 AL033527.5-201ENST00000641382 801 ntBASIC12.39□□□□□ -0.43
CD28P10747 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD28P10747 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms