Protein–RNA interactions for Protein: P0CI01

SPDYE6, Putative speedy protein E6, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE6P0CI01 MTND4LP31-201ENST00000514859 294 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 AC010328.2-201ENST00000597698 1111 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 AC084346.2-201ENST00000607097 949 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 AC009542.2-202ENST00000619004 1067 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 RHOXF1P1-202ENST00000635473 501 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 AC012313.1-201ENST00000593393 3059 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 DRD5P1-201ENST00000456605 1438 ntBASIC18.81■□□□□ 0.6
SPDYE6P0CI01 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPDYE6P0CI01 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 ACKR1-201ENST00000368121 1240 ntBASIC18.8■□□□□ 0.6
SPDYE6P0CI01 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 AC114495.2-201ENST00000452686 437 ntBASIC18.8■□□□□ 0.6
SPDYE6P0CI01 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 AC022784.5-201ENST00000522241 437 ntBASIC18.8■□□□□ 0.6
SPDYE6P0CI01 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPDYE6P0CI01 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 AC099548.2-209ENST00000480264 625 ntBASIC18.79■□□□□ 0.6
SPDYE6P0CI01 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 AC008687.7-202ENST00000637404 953 ntBASIC18.79■□□□□ 0.6
SPDYE6P0CI01 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 AC106886.4-201ENST00000623557 2502 ntBASIC18.79■□□□□ 0.6
SPDYE6P0CI01 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPDYE6P0CI01 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.78■□□□□ 0.6
SPDYE6P0CI01 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.78■□□□□ 0.6
SPDYE6P0CI01 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPDYE6P0CI01 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPDYE6P0CI01 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPDYE6P0CI01 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms