Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.4■□□□□ 0.22
CD48P09326 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.4■□□□□ 0.22
CD48P09326 AL589739.1-201ENST00000607720 493 ntBASIC16.4■□□□□ 0.22
CD48P09326 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 AC023157.3-201ENST00000619086 2088 ntBASIC16.4■□□□□ 0.22
CD48P09326 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CD48P09326 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.4■□□□□ 0.22
CD48P09326 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD48P09326 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CD48P09326 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CD48P09326 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 RPL37AP1-201ENST00000412502 279 ntBASIC16.39■□□□□ 0.21
CD48P09326 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.39■□□□□ 0.21
CD48P09326 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CD48P09326 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD48P09326 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD48P09326 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD48P09326 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CD48P09326 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CD48P09326 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 FO393414.2-201ENST00000405153 598 ntBASIC16.38■□□□□ 0.21
CD48P09326 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 TARDBPP1-201ENST00000442013 1203 ntBASIC16.38■□□□□ 0.21
CD48P09326 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.38■□□□□ 0.21
CD48P09326 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CD48P09326 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.38■□□□□ 0.21
CD48P09326 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.38■□□□□ 0.21
CD48P09326 AP001160.2-201ENST00000596071 487 ntBASIC16.38■□□□□ 0.21
CD48P09326 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 SPDYE12P-201ENST00000618416 771 ntBASIC16.38■□□□□ 0.21
CD48P09326 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CD48P09326 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD48P09326 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms