Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.77■□□□□ 0.59
COL1A1P02452 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.77■□□□□ 0.59
COL1A1P02452 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.77■□□□□ 0.59
COL1A1P02452 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.77■□□□□ 0.59
COL1A1P02452 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.77■□□□□ 0.59
COL1A1P02452 AC025279.2-201ENST00000569730 653 ntBASIC18.77■□□□□ 0.59
COL1A1P02452 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.77■□□□□ 0.59
COL1A1P02452 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL1A1P02452 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
COL1A1P02452 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.76■□□□□ 0.59
COL1A1P02452 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.76■□□□□ 0.59
COL1A1P02452 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.76■□□□□ 0.59
COL1A1P02452 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.76■□□□□ 0.59
COL1A1P02452 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 ZNF767P-206ENST00000513792 565 ntBASIC18.76■□□□□ 0.59
COL1A1P02452 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.76■□□□□ 0.59
COL1A1P02452 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.76■□□□□ 0.59
COL1A1P02452 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL1A1P02452 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
COL1A1P02452 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COL1A1P02452 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
COL1A1P02452 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 AC148477.4-201ENST00000613430 1793 ntBASIC18.75■□□□□ 0.59
COL1A1P02452 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 AL513523.2-202ENST00000427283 2040 ntBASIC18.75■□□□□ 0.59
COL1A1P02452 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.75■□□□□ 0.59
COL1A1P02452 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 RPL13AP20-201ENST00000459725 609 ntBASIC18.75■□□□□ 0.59
COL1A1P02452 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.75■□□□□ 0.59
COL1A1P02452 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.75■□□□□ 0.59
COL1A1P02452 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.75■□□□□ 0.59
COL1A1P02452 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.75■□□□□ 0.59
COL1A1P02452 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.75■□□□□ 0.59
COL1A1P02452 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
COL1A1P02452 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL1A1P02452 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL1A1P02452 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL1A1P02452 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL1A1P02452 CICP13-201ENST00000422015 2789 ntBASIC18.74■□□□□ 0.59
COL1A1P02452 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 ACTBP8-201ENST00000403258 1108 ntBASIC18.74■□□□□ 0.59
COL1A1P02452 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.74■□□□□ 0.59
COL1A1P02452 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.74■□□□□ 0.59
COL1A1P02452 CNN2P8-201ENST00000421872 913 ntBASIC18.74■□□□□ 0.59
COL1A1P02452 GOLGA2P4-201ENST00000441462 777 ntBASIC18.74■□□□□ 0.59
COL1A1P02452 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.74■□□□□ 0.59
COL1A1P02452 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.74■□□□□ 0.59
COL1A1P02452 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms