Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE6O95741 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE6O95741 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE6O95741 AC138969.3-201ENST00000546612 1459 ntBASIC15.58■□□□□ 0.08
CPNE6O95741 AC138932.2-201ENST00000548268 1459 ntBASIC15.58■□□□□ 0.08
CPNE6O95741 AC126755.4-201ENST00000549796 1459 ntBASIC15.58■□□□□ 0.08
CPNE6O95741 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE6O95741 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE6O95741 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE6O95741 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE6O95741 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.58■□□□□ 0.08
CPNE6O95741 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE6O95741 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE6O95741 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CPNE6O95741 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CPNE6O95741 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE6O95741 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE6O95741 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE6O95741 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE6O95741 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
CPNE6O95741 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE6O95741 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE6O95741 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE6O95741 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE6O95741 OR8S1-201ENST00000310194 1080 ntBASIC15.56■□□□□ 0.08
CPNE6O95741 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE6O95741 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.56■□□□□ 0.08
CPNE6O95741 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CPNE6O95741 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.56■□□□□ 0.08
CPNE6O95741 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.56■□□□□ 0.08
CPNE6O95741 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.56■□□□□ 0.08
CPNE6O95741 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE6O95741 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 GGT3P-204ENST00000453783 1664 ntBASIC15.56■□□□□ 0.08
CPNE6O95741 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CPNE6O95741 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE6O95741 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE6O95741 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE6O95741 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms