Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.81■□□□□ 0.6
MBD4O95243 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
MBD4O95243 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.81■□□□□ 0.6
MBD4O95243 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.81■□□□□ 0.6
MBD4O95243 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MBD4O95243 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MBD4O95243 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.81■□□□□ 0.6
MBD4O95243 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MBD4O95243 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MBD4O95243 AC092127.1-201ENST00000567093 3455 ntBASIC18.8■□□□□ 0.6
MBD4O95243 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 AP006294.1-201ENST00000415407 339 ntBASIC18.8■□□□□ 0.6
MBD4O95243 NME2P1-201ENST00000426182 414 ntBASIC18.8■□□□□ 0.6
MBD4O95243 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.8■□□□□ 0.6
MBD4O95243 AC104596.2-201ENST00000512793 793 ntBASIC18.8■□□□□ 0.6
MBD4O95243 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 AC092552.1-201ENST00000547243 906 ntBASIC18.8■□□□□ 0.6
MBD4O95243 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MBD4O95243 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.8■□□□□ 0.6
MBD4O95243 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MBD4O95243 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
MBD4O95243 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MBD4O95243 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MBD4O95243 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.79■□□□□ 0.6
MBD4O95243 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.79■□□□□ 0.6
MBD4O95243 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.79■□□□□ 0.6
MBD4O95243 TMEM261P1-201ENST00000604899 340 ntBASIC18.79■□□□□ 0.6
MBD4O95243 WFDC1-204ENST00000613603 549 ntBASIC18.79■□□□□ 0.6
MBD4O95243 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MBD4O95243 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.79■□□□□ 0.6
MBD4O95243 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MBD4O95243 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MBD4O95243 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.78■□□□□ 0.6
MBD4O95243 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.78■□□□□ 0.6
MBD4O95243 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MBD4O95243 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MBD4O95243 AC008741.2-201ENST00000612792 3115 ntBASIC18.78■□□□□ 0.6
MBD4O95243 AC098614.1-201ENST00000368528 745 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms