Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
BEST1O76090 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
BEST1O76090 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
BEST1O76090 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
BEST1O76090 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
BEST1O76090 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BEST1O76090 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST1O76090 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
BEST1O76090 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
BEST1O76090 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
BEST1O76090 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST1O76090 FAM86LP-201ENST00000478302 853 ntBASIC16.53■□□□□ 0.24
BEST1O76090 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST1O76090 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.53■□□□□ 0.24
BEST1O76090 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
BEST1O76090 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.53■□□□□ 0.24
BEST1O76090 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
BEST1O76090 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
BEST1O76090 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.53■□□□□ 0.24
BEST1O76090 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST1O76090 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST1O76090 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.52■□□□□ 0.24
BEST1O76090 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST1O76090 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST1O76090 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BEST1O76090 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST1O76090 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST1O76090 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.52■□□□□ 0.24
BEST1O76090 AC005225.4-201ENST00000557330 545 ntBASIC16.52■□□□□ 0.24
BEST1O76090 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST1O76090 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
BEST1O76090 AC036164.1-201ENST00000570544 333 ntBASIC16.52■□□□□ 0.24
BEST1O76090 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.52■□□□□ 0.24
BEST1O76090 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.52■□□□□ 0.24
BEST1O76090 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
BEST1O76090 HYMAI-201ENST00000635591 3347 ntBASIC16.52■□□□□ 0.24
BEST1O76090 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.52■□□□□ 0.24
BEST1O76090 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.52■□□□□ 0.23
BEST1O76090 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.23
BEST1O76090 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.52■□□□□ 0.23
BEST1O76090 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.52■□□□□ 0.23
BEST1O76090 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.52■□□□□ 0.23
BEST1O76090 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BEST1O76090 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms