Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC061975.2-201ENST00000581722 295 ntBASIC15.96■□□□□ 0.15
GPC4O75487 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.96■□□□□ 0.15
GPC4O75487 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.96■□□□□ 0.15
GPC4O75487 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.96■□□□□ 0.15
GPC4O75487 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
GPC4O75487 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
GPC4O75487 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
GPC4O75487 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC4O75487 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.96■□□□□ 0.14
GPC4O75487 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
GPC4O75487 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GPC4O75487 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
GPC4O75487 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
GPC4O75487 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 AC069224.1-201ENST00000566372 1715 ntBASIC15.95■□□□□ 0.14
GPC4O75487 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 GPS2P2-201ENST00000430745 888 ntBASIC15.95■□□□□ 0.14
GPC4O75487 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 DNAJB3-202ENST00000449667 1266 ntBASIC15.95■□□□□ 0.14
GPC4O75487 AC245100.5-201ENST00000452108 331 ntBASIC15.95■□□□□ 0.14
GPC4O75487 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.95■□□□□ 0.14
GPC4O75487 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 AC024267.1-201ENST00000582320 895 ntBASIC15.95■□□□□ 0.14
GPC4O75487 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.95■□□□□ 0.14
GPC4O75487 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 AP3S2-216ENST00000617003 1561 ntBASIC15.95■□□□□ 0.14
GPC4O75487 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC4O75487 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GPC4O75487 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC4O75487 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.94■□□□□ 0.14
GPC4O75487 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
GPC4O75487 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.94■□□□□ 0.14
GPC4O75487 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 HLA-H-201ENST00000383620 1096 ntBASIC15.94■□□□□ 0.14
GPC4O75487 KRT18P32-201ENST00000424695 1287 ntBASIC15.94■□□□□ 0.14
GPC4O75487 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.94■□□□□ 0.14
GPC4O75487 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.94■□□□□ 0.14
GPC4O75487 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 AC009093.7-201ENST00000623853 1223 ntBASIC15.94■□□□□ 0.14
GPC4O75487 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
GPC4O75487 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
GPC4O75487 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.94■□□□□ 0.14
GPC4O75487 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms