Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 AC024909.3-201ENST00000611513 2257 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CPNE3O75131 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 AL391825.1-201ENST00000457671 1364 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE3O75131 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CPNE3O75131 AC087499.6-201ENST00000411576 835 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 AC114501.2-201ENST00000439631 535 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE3O75131 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 CR383656.12-201ENST00000549567 513 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 AL596325.1-201ENST00000563991 1082 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 TP53TG3HP-202ENST00000569755 579 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.28■□□□□ 0.04
CPNE3O75131 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CPNE3O75131 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE3O75131 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CPNE3O75131 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CPNE3O75131 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 AL365209.1-201ENST00000624418 6473 ntBASIC15.28■□□□□ 0.04
CPNE3O75131 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE3O75131 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE3O75131 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE3O75131 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CPNE3O75131 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CPNE3O75131 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.04
CPNE3O75131 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE3O75131 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE3O75131 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CPNE3O75131 AC244107.1-201ENST00000442033 332 ntBASIC15.27■□□□□ 0.04
CPNE3O75131 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE3O75131 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.27■□□□□ 0.04
CPNE3O75131 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CPNE3O75131 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.27■□□□□ 0.04
CPNE3O75131 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.27■□□□□ 0.04
CPNE3O75131 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.27■□□□□ 0.04
CPNE3O75131 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CPNE3O75131 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE3O75131 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.27■□□□□ 0.03
CPNE3O75131 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE3O75131 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.27■□□□□ 0.03
CPNE3O75131 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE3O75131 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
CPNE3O75131 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE3O75131 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CPNE3O75131 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CPNE3O75131 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.26■□□□□ 0.03
CPNE3O75131 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CPNE3O75131 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms