Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 AC044860.1-202ENST00000559481 777 ntBASIC19.52■□□□□ 0.72
SMARCA5O60264 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCA5O60264 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCA5O60264 AC005498.2-205ENST00000593218 784 ntBASIC19.52■□□□□ 0.72
SMARCA5O60264 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.52■□□□□ 0.72
SMARCA5O60264 AL158211.3-201ENST00000607385 239 ntBASIC19.52■□□□□ 0.72
SMARCA5O60264 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.52■□□□□ 0.72
SMARCA5O60264 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.52■□□□□ 0.71
SMARCA5O60264 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCA5O60264 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.52■□□□□ 0.71
SMARCA5O60264 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCA5O60264 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMARCA5O60264 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SMARCA5O60264 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SMARCA5O60264 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SMARCA5O60264 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SMARCA5O60264 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.51■□□□□ 0.71
SMARCA5O60264 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCA5O60264 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCA5O60264 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCA5O60264 AC055876.3-201ENST00000431496 288 ntBASIC19.51■□□□□ 0.71
SMARCA5O60264 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.51■□□□□ 0.71
SMARCA5O60264 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.51■□□□□ 0.71
SMARCA5O60264 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.51■□□□□ 0.71
SMARCA5O60264 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 AC138649.4-201ENST00000612222 287 ntBASIC19.51■□□□□ 0.71
SMARCA5O60264 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.51■□□□□ 0.71
SMARCA5O60264 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SMARCA5O60264 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCA5O60264 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCA5O60264 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SMARCA5O60264 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SMARCA5O60264 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.51■□□□□ 0.71
SMARCA5O60264 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMARCA5O60264 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCA5O60264 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 AC087481.3-201ENST00000602886 1894 ntBASIC19.5■□□□□ 0.71
SMARCA5O60264 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCA5O60264 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.5■□□□□ 0.71
SMARCA5O60264 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SMARCA5O60264 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 MIR6069-201ENST00000620069 79 ntBASIC19.5■□□□□ 0.71
SMARCA5O60264 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCA5O60264 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.5■□□□□ 0.71
SMARCA5O60264 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCA5O60264 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCA5O60264 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms