Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FGD5P1-202ENST00000614866 2498 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
SSSCA1O60232 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.99□□□□□ -0.33
SSSCA1O60232 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 KRT8P44-201ENST00000441609 1350 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 AC093724.1-201ENST00000448659 1027 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 RPS15P9-201ENST00000494093 319 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 SART3-203ENST00000546611 1184 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 AL031055.1-201ENST00000606362 631 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 AL732292.2-201ENST00000609649 430 ntBASIC12.99□□□□□ -0.33
SSSCA1O60232 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SSSCA1O60232 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.99□□□□□ -0.33
SSSCA1O60232 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SSSCA1O60232 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SSSCA1O60232 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSSCA1O60232 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 AC126365.1-201ENST00000578585 1514 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 IER3-202ENST00000376377 1350 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
SSSCA1O60232 RNU1-129P-201ENST00000384064 167 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 PCED1CP-201ENST00000419887 785 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 AP002469.2-201ENST00000531724 424 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 U1.21-201ENST00000580816 167 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.98□□□□□ -0.33
SSSCA1O60232 AC006557.2-201ENST00000592985 1240 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
SSSCA1O60232 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.98□□□□□ -0.33
SSSCA1O60232 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 AC005912.2-201ENST00000619492 2400 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.98□□□□□ -0.33
SSSCA1O60232 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.98□□□□□ -0.33
SSSCA1O60232 AC117489.1-201ENST00000625169 3217 ntBASIC12.98□□□□□ -0.33
SSSCA1O60232 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SSSCA1O60232 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSSCA1O60232 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSSCA1O60232 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
SSSCA1O60232 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms