Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASQ2O14958 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CASQ2O14958 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 PRORSD1P-201ENST00000295112 541 ntBASIC15.09■□□□□ 0.01
CASQ2O14958 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.09■□□□□ 0.01
CASQ2O14958 GCSHP5-201ENST00000443090 522 ntBASIC15.09■□□□□ 0.01
CASQ2O14958 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.09■□□□□ 0.01
CASQ2O14958 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 AL160237.2-201ENST00000556165 472 ntBASIC15.09■□□□□ 0.01
CASQ2O14958 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 HYMAI.1-201ENST00000620949 238 ntBASIC15.09■□□□□ 0.01
CASQ2O14958 AC011558.1-201ENST00000623459 338 ntBASIC15.09■□□□□ 0.01
CASQ2O14958 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.09■□□□□ 0.01
CASQ2O14958 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CASQ2O14958 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASQ2O14958 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CASQ2O14958 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CASQ2O14958 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CASQ2O14958 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CASQ2O14958 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC15.08■□□□□ 0.01
CASQ2O14958 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CASQ2O14958 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CASQ2O14958 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 AC023024.2-201ENST00000623561 1993 ntBASIC15.08■□□□□ 0
CASQ2O14958 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 SLC25A3P1-201ENST00000443844 931 ntBASIC15.08■□□□□ 0
CASQ2O14958 AC087163.2-201ENST00000457299 853 ntBASIC15.08■□□□□ 0
CASQ2O14958 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.08■□□□□ 0
CASQ2O14958 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.08■□□□□ 0
CASQ2O14958 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 AC090616.6-201ENST00000582640 721 ntBASIC15.08■□□□□ 0
CASQ2O14958 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 AP001350.2-201ENST00000625104 1094 ntBASIC15.08■□□□□ 0
CASQ2O14958 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CASQ2O14958 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.08■□□□□ 0
CASQ2O14958 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CASQ2O14958 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CASQ2O14958 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CASQ2O14958 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.07■□□□□ 0
CASQ2O14958 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CASQ2O14958 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CASQ2O14958 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms