Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDH17O14917 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 RN7SL204P-201ENST00000582831 262 ntBASIC15.17■□□□□ 0.02
PCDH17O14917 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDH17O14917 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.17■□□□□ 0.02
PCDH17O14917 AL133215.2-201ENST00000609242 977 ntBASIC15.17■□□□□ 0.02
PCDH17O14917 TEX28P1-201ENST00000613479 1221 ntBASIC15.17■□□□□ 0.02
PCDH17O14917 TEX28P2-201ENST00000617764 1221 ntBASIC15.17■□□□□ 0.02
PCDH17O14917 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.17■□□□□ 0.02
PCDH17O14917 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 AP002414.2-201ENST00000591780 3365 ntBASIC15.17■□□□□ 0.02
PCDH17O14917 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDH17O14917 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDH17O14917 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDH17O14917 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 AC022144.1-201ENST00000602255 1580 ntBASIC15.16■□□□□ 0.02
PCDH17O14917 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.16■□□□□ 0.02
PCDH17O14917 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH17O14917 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.16■□□□□ 0.02
PCDH17O14917 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH17O14917 BANF1P1-201ENST00000553684 263 ntBASIC15.16■□□□□ 0.02
PCDH17O14917 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH17O14917 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH17O14917 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH17O14917 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH17O14917 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH17O14917 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 AP003680.1-201ENST00000598970 3660 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms