Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 SPDYE12P-201ENST00000618416 771 ntBASIC16.15■□□□□ 0.18
CAPN8A6NHC0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN8A6NHC0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CAPN8A6NHC0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CAPN8A6NHC0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
CAPN8A6NHC0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.14■□□□□ 0.18
CAPN8A6NHC0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 HLA-V-204ENST00000476601 1289 ntBASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AL158211.3-201ENST00000607385 239 ntBASIC16.14■□□□□ 0.17
CAPN8A6NHC0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 CETN4P-206ENST00000642099 2168 ntBASIC16.14■□□□□ 0.17
CAPN8A6NHC0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 AC073347.1-201ENST00000421633 2643 ntBASIC16.14■□□□□ 0.17
CAPN8A6NHC0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CAPN8A6NHC0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC004987.2-201ENST00000395959 1148 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC055876.3-201ENST00000431496 288 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC245100.3-201ENST00000441281 285 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 DUX4L27-201ENST00000554796 1261 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AL079307.3-201ENST00000556114 283 ntBASIC16.13■□□□□ 0.17
CAPN8A6NHC0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN8A6NHC0 AL589739.1-201ENST00000607720 493 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms