Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC020658.6-201ENST00000623564 1870 ntBASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC196A0A1B0GTZ2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC132872.4-202ENST00000622924 2756 ntBASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL844908.2-201ENST00000609461 460 ntBASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC074044.1-201ENST00000609673 707 ntBASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC105250.1-201ENST00000509378 2057 ntBASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 AC092127.1-201ENST00000567093 3455 ntBASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC196A0A1B0GTZ2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC196A0A1B0GTZ2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CCDC196A0A1B0GTZ2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC196A0A1B0GTZ2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC196A0A1B0GTZ2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 TSSK5P-201ENST00000423978 907 ntBASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 BASP1P1-201ENST00000430708 665 ntBASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL390754.1-201ENST00000619088 582 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms