Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LOC102724428A0A0B4J2F2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 HINT2P1-201ENST00000419438 481 ntBASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 NKAIN1P1-201ENST00000435754 582 ntBASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 IMP3P2-201ENST00000489760 475 ntBASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 AC097724.1-201ENST00000609581 426 ntBASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 AC244157.2-201ENST00000616239 1006 ntBASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LOC102724428A0A0B4J2F2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 CYP46A4P-201ENST00000414953 267 ntBASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 AC044849.1-201ENST00000519737 1188 ntBASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 AC007663.3-201ENST00000609632 465 ntBASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.83■□□□□ 0.77
LOC102724428A0A0B4J2F2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LOC102724428A0A0B4J2F2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC018695.7-201ENST00000624587 2492 ntBASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 MIR4722-201ENST00000578292 60 ntBASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC091812.3-201ENST00000621362 345 ntBASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LOC102724428A0A0B4J2F2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms