Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 MTX1P1-201ENST00000440904 838 ntBASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AC004898.1-201ENST00000451057 766 ntBASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AKR7A2P1-201ENST00000460134 915 ntBASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 RPSAP36-202ENST00000494591 1261 ntBASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AC006453.4-201ENST00000636949 1252 ntBASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC2Q9Y5Z7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HCFC2Q9Y5Z7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HCFC2Q9Y5Z7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.39■□□□□ 0.22
HCFC2Q9Y5Z7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
HCFC2Q9Y5Z7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 ACTG1P17-201ENST00000558391 1119 ntBASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 AP006547.1-201ENST00000563435 692 ntBASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC2Q9Y5Z7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 AC104982.3-201ENST00000581995 514 ntBASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 EEF1DP1-201ENST00000585891 896 ntBASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 BX539320.1-201ENST00000623759 877 ntBASIC16.38■□□□□ 0.21
HCFC2Q9Y5Z7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms