Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC104596.2-201ENST00000512793 793 ntBASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 RARRES2P5-201ENST00000564013 466 ntBASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC025048.3-201ENST00000590609 569 ntBASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AC005702.4-201ENST00000618393 416 ntBASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 AL031731.1-201ENST00000642131 2094 ntBASIC14.85□□□□□ -0.03
PCDHGA9Q9Y5G4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 AC098850.1-201ENST00000419919 790 ntBASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 WFDC1-204ENST00000613603 549 ntBASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 AL033527.5-201ENST00000641382 801 ntBASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHGA9Q9Y5G4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHGA9Q9Y5G4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCDHGA9Q9Y5G4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms