Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RNF11Q9Y3C5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AC092127.1-201ENST00000567093 3455 ntBASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 HLA-H-201ENST00000383620 1096 ntBASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF11Q9Y3C5 AP3S2-216ENST00000617003 1561 ntBASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 ELL2P1-201ENST00000413990 1906 ntBASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 RPS8P6-201ENST00000426177 609 ntBASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CEND1P1-201ENST00000451006 455 ntBASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 REXO1L1P-202ENST00000608646 1974 ntBASIC15.49■□□□□ 0.07
RNF11Q9Y3C5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms