Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC005089.1-201ENST00000619486 2241 ntBASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 FAM86EP-206ENST00000510506 987 ntBASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC091076.1-201ENST00000610741 619 ntBASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC116407.4-201ENST00000623319 1061 ntBASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 CICP23-201ENST00000605013 2741 ntBASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AP001282.1-201ENST00000531301 1499 ntBASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
KCNIP3Q9Y2W7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
KCNIP3Q9Y2W7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AC006557.2-201ENST00000592985 1240 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 MTDHP3-201ENST00000594186 672 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 MTDHP4-201ENST00000600287 670 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms