Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 BNIP3P1-202ENST00000550043 1585 ntBASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 AC073347.1-201ENST00000421633 2643 ntBASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 HAUS4P1-201ENST00000406739 1145 ntBASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 HIST3H2BA-201ENST00000436555 524 ntBASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.92■□□□□ 0.14
CNOT6Q9ULM6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 AC009477.1-201ENST00000452936 217 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 INGX-202ENST00000489074 768 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 AL512361.1-201ENST00000554200 418 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 AC009407.1-201ENST00000568958 598 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 AC011467.4-201ENST00000594891 528 ntBASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CNOT6Q9ULM6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNOT6Q9ULM6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms