Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 DNAJB1P1-201ENST00000429417 1024 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 RN7SL67P-201ENST00000492147 296 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 RPL17P45-201ENST00000586289 509 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 AP001065.2-201ENST00000617205 644 ntBASIC31.38■■■□□ 2.61
CCDC180Q9P1Z9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 TBC1D3J-201ENST00000620719 1426 ntBASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 NEU3-205ENST00000531619 582 ntTSL 5 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 RN7SL163P-201ENST00000583100 276 ntBASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CCDC180Q9P1Z9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 RPL18P13-201ENST00000478088 569 ntBASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 AC087045.2-201ENST00000606279 1003 ntBASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 AC138696.2-201ENST00000607376 223 ntBASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 FAM90A7P-201ENST00000382628 1395 ntBASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 FAM90A23P-201ENST00000400136 1395 ntBASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 AL008718.2-201ENST00000609206 1313 ntBASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCDC180Q9P1Z9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 AC092171.5-201ENST00000608012 942 ntBASIC31.35■■■□□ 2.61
CCDC180Q9P1Z9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 AC124067.4-201ENST00000519691 2379 ntBASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC180Q9P1Z9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 NAP1L6-202ENST00000641404 1222 ntBASIC31.33■■■□□ 2.61
CCDC180Q9P1Z9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC31.32■■■□□ 2.61
CCDC180Q9P1Z9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
CCDC180Q9P1Z9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 HNRNPA1P41-201ENST00000397777 928 ntBASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 AL136301.1-201ENST00000615830 422 ntBASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC31.32■■■□□ 2.6
CCDC180Q9P1Z9 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms