Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CXXC1Q9P0U4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AC079178.1-201ENST00000420915 656 ntBASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 RN7SL11P-201ENST00000471305 293 ntBASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 RN7SL774P-201ENST00000577467 290 ntBASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 RN7SL574P-201ENST00000581512 297 ntBASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AL133499.1-201ENST00000596207 608 ntBASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AC244157.2-201ENST00000616239 1006 ntBASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.78■□□□□ 0.28
CXXC1Q9P0U4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 TUBBP5-203ENST00000508529 1334 ntBASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PRKXP1-201ENST00000561423 1122 ntBASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 AC005730.2-201ENST00000564549 1184 ntBASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CXXC1Q9P0U4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CXXC1Q9P0U4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms