Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC245100.5-201ENST00000452108 331 ntBASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 AC004706.3-202ENST00000621574 984 ntBASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCM2LQ9NUG4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 KRT8P44-201ENST00000441609 1350 ntBASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 KRT18P27-201ENST00000427733 1299 ntBASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 C20orf181-201ENST00000623918 480 ntBASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 AC092865.6-201ENST00000642101 219 ntBASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCM2LQ9NUG4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCM2LQ9NUG4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms