Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AC018665.1-201ENST00000622927 1362 ntBASIC18.94■□□□□ 0.62
SALL1Q9NSC2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 CROCCP4-201ENST00000457096 498 ntBASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 GAPDHP40-201ENST00000505218 1006 ntBASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SALL1Q9NSC2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 DRD5P1-201ENST00000456605 1438 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 ANKRD19P-201ENST00000338192 862 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AC005229.1-201ENST00000392885 409 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 KRT43P-201ENST00000434019 910 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 TDH-203ENST00000531764 1110 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AP005482.1-201ENST00000563722 1273 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 MIR4259-201ENST00000584466 101 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 AC005252.2-201ENST00000624630 1141 ntBASIC18.93■□□□□ 0.62
SALL1Q9NSC2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SALL1Q9NSC2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 RPS2P32-201ENST00000439199 892 ntBASIC18.92■□□□□ 0.62
SALL1Q9NSC2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.92■□□□□ 0.62
SALL1Q9NSC2 AC068587.3-201ENST00000526613 355 ntBASIC18.92■□□□□ 0.62
SALL1Q9NSC2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms