Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AC061975.2-201ENST00000581722 295 ntBASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 MIR3687-1-201ENST00000614492 61 ntBASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 SBF1P1-201ENST00000444527 5631 ntBASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 FOXO1B-201ENST00000504678 1527 ntBASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CCDC68Q9H2F9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 LINC02228-204ENST00000642115 2962 ntBASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 OR2I1P-210ENST00000642037 4691 ntBASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC68Q9H2F9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 MIR346-201ENST00000362234 95 ntBASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 AC026979.3-201ENST00000607315 403 ntBASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC68Q9H2F9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms