Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 AL139424.1-201ENST00000607572 797 ntBASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SLIRPQ9GZT3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
SLIRPQ9GZT3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 MYO15B-237ENST00000642007 4893 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 RCN1P2-201ENST00000398357 915 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 TSPY15P-201ENST00000457163 923 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 VENTXP7-201ENST00000475503 772 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 YBX1P2-201ENST00000489612 999 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 CD99P1-205ENST00000527459 561 ntBASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLIRPQ9GZT3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 KRT17P2-201ENST00000300992 1314 ntBASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.94□□□□□ -0.18
SLIRPQ9GZT3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms