Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 AC148477.4-201ENST00000613430 1793 ntBASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PHACTR1Q9C0D0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 KRT8P37-201ENST00000451609 1420 ntBASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 PHKG1P2-201ENST00000457537 863 ntBASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AC074386.1-202ENST00000463561 864 ntBASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AL138918.1-201ENST00000568306 659 ntBASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 AC091951.1-201ENST00000512854 2465 ntBASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.12■□□□□ 0.17
PHACTR1Q9C0D0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 RPL5P21-201ENST00000404620 815 ntBASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHACTR1Q9C0D0 AL136982.4-201ENST00000437689 1740 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms