Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AC074338.1-201ENST00000416825 156 ntBASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 DOC2GP-202ENST00000514950 1163 ntBASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AC104794.3-201ENST00000566840 1248 ntBASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM62Q9BVG3 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 AL133267.1-201ENST00000398220 340 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 KRT18P43-201ENST00000469825 1281 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 TERF1P3-201ENST00000505638 1227 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 RRP7BP-205ENST00000566851 833 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 LINC01115-203ENST00000606068 577 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 AC004233.3-201ENST00000607794 1269 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 AC008761.3-201ENST00000624803 892 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 AL391825.1-201ENST00000457671 1364 ntBASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TRIM62Q9BVG3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM62Q9BVG3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms