Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPAS2Q99743 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS2Q99743 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.59■□□□□ 0.09
NPAS2Q99743 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS2Q99743 AL513210.1-201ENST00000629608 234 ntBASIC15.59■□□□□ 0.09
NPAS2Q99743 AC105339.1-204ENST00000636249 355 ntBASIC15.59■□□□□ 0.09
NPAS2Q99743 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS2Q99743 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.59■□□□□ 0.09
NPAS2Q99743 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.59■□□□□ 0.09
NPAS2Q99743 KRT18P28-201ENST00000453838 1332 ntBASIC15.59■□□□□ 0.09
NPAS2Q99743 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.59■□□□□ 0.09
NPAS2Q99743 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS2Q99743 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPAS2Q99743 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS2Q99743 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
NPAS2Q99743 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS2Q99743 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.09
NPAS2Q99743 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.58■□□□□ 0.09
NPAS2Q99743 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
NPAS2Q99743 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS2Q99743 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 AC004461.1-201ENST00000412461 403 ntBASIC15.58■□□□□ 0.08
NPAS2Q99743 METTL21AP1-201ENST00000438852 635 ntBASIC15.58■□□□□ 0.08
NPAS2Q99743 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
NPAS2Q99743 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.58■□□□□ 0.08
NPAS2Q99743 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS2Q99743 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS2Q99743 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS2Q99743 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NPAS2Q99743 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.58■□□□□ 0.08
NPAS2Q99743 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS2Q99743 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS2Q99743 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS2Q99743 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS2Q99743 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NPAS2Q99743 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 TCAF2P1-201ENST00000291129 2421 ntBASIC15.58■□□□□ 0.08
NPAS2Q99743 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 AC091951.1-201ENST00000512854 2465 ntBASIC15.58■□□□□ 0.08
NPAS2Q99743 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
NPAS2Q99743 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS2Q99743 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NPAS2Q99743 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.57■□□□□ 0.08
NPAS2Q99743 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC002056.1-201ENST00000395613 760 ntBASIC15.57■□□□□ 0.08
NPAS2Q99743 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 AP000344.2-201ENST00000512987 629 ntBASIC15.57■□□□□ 0.08
NPAS2Q99743 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.57■□□□□ 0.08
NPAS2Q99743 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.57■□□□□ 0.08
NPAS2Q99743 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS2Q99743 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS2Q99743 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC022145.2-201ENST00000598203 171 ntBASIC15.57■□□□□ 0.08
NPAS2Q99743 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS2Q99743 AC023908.3-201ENST00000564211 3047 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms