Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 AP005117.1-202ENST00000581724 1908 ntBASIC13.29□□□□□ -0.28
CCL13Q99616 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 AC022188.1-201ENST00000620960 1664 ntBASIC13.29□□□□□ -0.28
CCL13Q99616 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL13Q99616 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL13Q99616 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL13Q99616 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL13Q99616 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.29□□□□□ -0.28
CCL13Q99616 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
CCL13Q99616 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.29□□□□□ -0.28
CCL13Q99616 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL13Q99616 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL13Q99616 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL13Q99616 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CCL13Q99616 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL13Q99616 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL13Q99616 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL13Q99616 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL13Q99616 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL13Q99616 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL13Q99616 AC010336.2-201ENST00000564226 506 ntBASIC13.28□□□□□ -0.28
CCL13Q99616 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL13Q99616 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL13Q99616 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL13Q99616 AL355385.1-201ENST00000606123 409 ntBASIC13.28□□□□□ -0.28
CCL13Q99616 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms