Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
S1PR3Q99500 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
S1PR3Q99500 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
S1PR3Q99500 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
S1PR3Q99500 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.15□□□□□ -0.3
S1PR3Q99500 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
S1PR3Q99500 AC138969.2-201ENST00000532739 9932 ntBASIC13.15□□□□□ -0.3
S1PR3Q99500 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
S1PR3Q99500 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
S1PR3Q99500 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
S1PR3Q99500 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
S1PR3Q99500 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
S1PR3Q99500 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
S1PR3Q99500 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
S1PR3Q99500 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
S1PR3Q99500 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
S1PR3Q99500 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
S1PR3Q99500 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.14□□□□□ -0.31
S1PR3Q99500 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.14□□□□□ -0.31
S1PR3Q99500 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 ADH5P3-201ENST00000433842 1137 ntBASIC13.14□□□□□ -0.31
S1PR3Q99500 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.14□□□□□ -0.31
S1PR3Q99500 TIMM8BP1-201ENST00000452384 211 ntBASIC13.14□□□□□ -0.31
S1PR3Q99500 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.14□□□□□ -0.31
S1PR3Q99500 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.14□□□□□ -0.31
S1PR3Q99500 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.14□□□□□ -0.31
S1PR3Q99500 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.14□□□□□ -0.31
S1PR3Q99500 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.14□□□□□ -0.31
S1PR3Q99500 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 AC073347.1-201ENST00000421633 2643 ntBASIC13.14□□□□□ -0.31
S1PR3Q99500 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.14□□□□□ -0.31
S1PR3Q99500 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
S1PR3Q99500 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.13□□□□□ -0.31
S1PR3Q99500 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
S1PR3Q99500 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.13□□□□□ -0.31
S1PR3Q99500 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
S1PR3Q99500 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
S1PR3Q99500 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms