Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 HYMAI-201ENST00000635591 3347 ntBASIC16.78■□□□□ 0.28
TRIM11Q96F44 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 AC006486.2-201ENST00000624246 2199 ntBASIC16.78■□□□□ 0.28
TRIM11Q96F44 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 AC136604.1-201ENST00000418535 575 ntBASIC16.78■□□□□ 0.28
TRIM11Q96F44 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM11Q96F44 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM11Q96F44 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 AL035456.1-201ENST00000456064 1369 ntBASIC16.77■□□□□ 0.28
TRIM11Q96F44 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 FO393414.2-201ENST00000405153 598 ntBASIC16.77■□□□□ 0.28
TRIM11Q96F44 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 FAM58DP-201ENST00000428076 619 ntBASIC16.77■□□□□ 0.28
TRIM11Q96F44 RBPMS2P1-201ENST00000437762 623 ntBASIC16.77■□□□□ 0.28
TRIM11Q96F44 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 AC097359.3-201ENST00000603982 1210 ntBASIC16.77■□□□□ 0.28
TRIM11Q96F44 AC007967.4-201ENST00000614700 386 ntBASIC16.77■□□□□ 0.28
TRIM11Q96F44 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM11Q96F44 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM11Q96F44 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM11Q96F44 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRIM11Q96F44 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM11Q96F44 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.77■□□□□ 0.27
TRIM11Q96F44 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM11Q96F44 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM11Q96F44 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TRIM11Q96F44 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
TRIM11Q96F44 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRIM11Q96F44 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM11Q96F44 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM11Q96F44 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM11Q96F44 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM11Q96F44 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms