Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC009090.5-201ENST00000624886 2285 ntBASIC13.93□□□□□ -0.18
TMEM54Q969K7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AC093512.1-201ENST00000617969 520 ntBASIC13.93□□□□□ -0.18
TMEM54Q969K7 AL109936.8-201ENST00000641772 604 ntBASIC13.93□□□□□ -0.18
TMEM54Q969K7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM54Q969K7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 PPT1-215ENST00000641471 2368 ntBASIC13.93□□□□□ -0.18
TMEM54Q969K7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.93□□□□□ -0.18
TMEM54Q969K7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 PMS2P2-201ENST00000425039 1128 ntBASIC13.92□□□□□ -0.18
TMEM54Q969K7 RPL13P2-201ENST00000440687 659 ntBASIC13.92□□□□□ -0.18
TMEM54Q969K7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 AC044860.1-202ENST00000559481 777 ntBASIC13.92□□□□□ -0.18
TMEM54Q969K7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 AC106028.4-201ENST00000614509 607 ntBASIC13.92□□□□□ -0.18
TMEM54Q969K7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM54Q969K7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM54Q969K7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 AL139384.1-201ENST00000612143 3047 ntBASIC13.91□□□□□ -0.18
TMEM54Q969K7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 AC126177.1-201ENST00000547829 2218 ntBASIC13.91□□□□□ -0.18
TMEM54Q969K7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM54Q969K7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM54Q969K7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms