Protein–RNA interactions for Protein: Q8WYL5

SSH1, Protein phosphatase Slingshot homolog 1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1Q8WYL5 AC092337.1-201ENST00000568699 1129 ntBASIC20.18■□□□□ 0.82
SSH1Q8WYL5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 AL355385.1-201ENST00000606123 409 ntBASIC20.18■□□□□ 0.82
SSH1Q8WYL5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 BTBD7P1-201ENST00000447253 1453 ntBASIC20.18■□□□□ 0.82
SSH1Q8WYL5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.18■□□□□ 0.82
SSH1Q8WYL5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.17■□□□□ 0.82
SSH1Q8WYL5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 MIR661-201ENST00000384842 89 ntBASIC20.17■□□□□ 0.82
SSH1Q8WYL5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 AC015922.1-201ENST00000421102 1152 ntBASIC20.17■□□□□ 0.82
SSH1Q8WYL5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 AC135586.1-201ENST00000539323 574 ntBASIC20.17■□□□□ 0.82
SSH1Q8WYL5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.17■□□□□ 0.82
SSH1Q8WYL5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSH1Q8WYL5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AC087481.3-201ENST00000602886 1894 ntBASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AC112693.3-201ENST00000624819 1983 ntBASIC20.16■□□□□ 0.82
SSH1Q8WYL5 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 TOMM22P5-201ENST00000416399 439 ntBASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AL512638.1-201ENST00000457493 794 ntBASIC20.16■□□□□ 0.82
SSH1Q8WYL5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSH1Q8WYL5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms