Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RTN4IP1Q8WWV3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 AC074386.1-202ENST00000463561 864 ntBASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 KRT18P58-201ENST00000527480 1120 ntBASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 AL513190.1-201ENST00000621254 727 ntBASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 AC011477.6-201ENST00000604980 1927 ntBASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.42□□□□□ -0.26
RTN4IP1Q8WWV3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 MIR940-201ENST00000401276 94 ntBASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AC092474.2-201ENST00000424288 719 ntBASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms