Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FNDC9Q8TBE3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 LINC00554-201ENST00000564841 3011 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 BNIP3P1-202ENST00000550043 1585 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AL596087.1-201ENST00000400979 1969 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC134407.2-201ENST00000625089 1978 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC009118.2-201ENST00000613275 655 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC068418.2-201ENST00000577309 3703 ntBASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.31□□□□□ -0.12
FNDC9Q8TBE3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ZNF890P-202ENST00000530367 1156 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms