Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH19Q8TAB3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 RPL37AP1-201ENST00000412502 279 ntBASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 BCRP1-201ENST00000444246 691 ntBASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 AC112693.3-201ENST00000624819 1983 ntBASIC16.35■□□□□ 0.21
PCDH19Q8TAB3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 DUX4L27-201ENST00000554796 1261 ntBASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 CETN4P-206ENST00000642099 2168 ntBASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 DBET-201ENST00000630918 3363 ntBASIC16.34■□□□□ 0.21
PCDH19Q8TAB3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDH19Q8TAB3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms