Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM35BQ8NCS4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM35BQ8NCS4 AC022532.1-201ENST00000624563 1728 ntBASIC16.79■□□□□ 0.28
TMEM35BQ8NCS4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM35BQ8NCS4 SSR4P1-203ENST00000599569 2260 ntBASIC16.79■□□□□ 0.28
TMEM35BQ8NCS4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC087481.3-201ENST00000602886 1894 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 KRT18P28-201ENST00000453838 1332 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC069120.2-201ENST00000524091 540 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC140878.1-201ENST00000565277 250 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC051619.7-201ENST00000568314 623 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 SPDYE12P-201ENST00000618416 771 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 TMBIM7P-203ENST00000641617 1718 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC067930.6-201ENST00000623257 4947 ntBASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TMEM35BQ8NCS4 NORAD-201ENST00000565493 5339 ntBASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AC090616.6-203ENST00000579186 1945 ntBASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AC107890.1-201ENST00000422478 521 ntBASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 METTL21AP1-201ENST00000438852 635 ntBASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 FAM86GP-201ENST00000448322 971 ntBASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TMEM35BQ8NCS4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms