Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC4A11Q8NBS3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC4A11Q8NBS3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC4A11Q8NBS3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 TSPY16P-201ENST00000449843 468 ntBASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 AC104794.3-201ENST00000566840 1248 ntBASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC4A11Q8NBS3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 TOMM22P5-201ENST00000416399 439 ntBASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 AC020658.6-201ENST00000623564 1870 ntBASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC4A11Q8NBS3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 AC090616.6-203ENST00000579186 1945 ntBASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC4A11Q8NBS3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms