Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 AC105021.1-202ENST00000570572 669 ntBASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC33Q8N5R6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 NME2P1-201ENST00000426182 414 ntBASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 AC009477.1-201ENST00000452936 217 ntBASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 AC087499.5-201ENST00000452760 1342 ntBASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 AC134407.2-201ENST00000625089 1978 ntBASIC16.68■□□□□ 0.26
CCDC33Q8N5R6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 AL844908.2-201ENST00000609461 460 ntBASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC33Q8N5R6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms