Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC079776.2-201ENST00000641154 1609 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 PRYP5-201ENST00000451909 266 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SART3-203ENST00000546611 1184 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC105339.3-201ENST00000560043 636 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC006557.2-201ENST00000592985 1240 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 FAM197Y3-203ENST00000618346 717 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 MIR1199-201ENST00000621445 119 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC073592.4-201ENST00000623827 446 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC006486.2-201ENST00000624246 2199 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC107918.4-202ENST00000641623 219 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 SSR4P1-203ENST00000599569 2260 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 AC132938.5-201ENST00000624980 1813 ntBASIC13.94□□□□□ -0.18
C11orf88Q6PI97 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
C11orf88Q6PI97 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 AC006277.1-201ENST00000624348 1610 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 AC023908.3-201ENST00000564211 3047 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SIGLEC16-201ENST00000599858 1437 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 AC112504.1-201ENST00000623415 1841 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 SPDYE21P-201ENST00000413323 827 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 POU5F1P6-201ENST00000466990 990 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 MTDHP4-201ENST00000600287 670 ntBASIC13.93□□□□□ -0.18
C11orf88Q6PI97 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
C11orf88Q6PI97 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms