Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 AC233724.13-201ENST00000598383 410 ntBASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 COX11-210ENST00000639671 696 ntBASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC62Q6P9F0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC62Q6P9F0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC62Q6P9F0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC62Q6P9F0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC62Q6P9F0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC62Q6P9F0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AC234783.1-201ENST00000441761 496 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 ENPP7P5-201ENST00000541031 1031 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AP005482.1-201ENST00000563722 1273 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AC000095.1-201ENST00000603208 874 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AC018665.1-201ENST00000622927 1362 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 AC018892.3-201ENST00000623986 2499 ntBASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC62Q6P9F0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 MIR648-201ENST00000385046 94 ntBASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 AC134915.1-201ENST00000426461 574 ntBASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 INTS4P2-202ENST00000614726 2019 ntBASIC17.75■□□□□ 0.43
CCDC62Q6P9F0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms