Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 AL158047.1-201ENST00000445918 881 ntBASIC12.04□□□□□ -0.48
MRPL54Q6P161 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 AC009090.5-201ENST00000624886 2285 ntBASIC12.04□□□□□ -0.48
MRPL54Q6P161 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 AL590787.1-201ENST00000568856 1315 ntBASIC12.04□□□□□ -0.48
MRPL54Q6P161 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.04□□□□□ -0.48
MRPL54Q6P161 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 U82695.1-201ENST00000635752 1889 ntBASIC12.04□□□□□ -0.48
MRPL54Q6P161 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MRPL54Q6P161 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC090192.1-201ENST00000517740 490 ntBASIC12.03□□□□□ -0.48
MRPL54Q6P161 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 VENTXP5-201ENST00000523979 775 ntBASIC12.03□□□□□ -0.48
MRPL54Q6P161 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AL355075.4-201ENST00000554988 638 ntBASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AL353801.3-201ENST00000609898 542 ntBASIC12.03□□□□□ -0.48
MRPL54Q6P161 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 PMPCAP1-201ENST00000508114 1576 ntBASIC12.03□□□□□ -0.48
MRPL54Q6P161 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.03□□□□□ -0.48
MRPL54Q6P161 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MRPL54Q6P161 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms