Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 AJ011931.1-201ENST00000618749 2492 ntBASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDKAL1Q5VV42 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 ACTG1P14-201ENST00000446382 1122 ntBASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 AL009178.2-201ENST00000597278 2719 ntBASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 UXT-AS1-201ENST00000590504 1525 ntBASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDKAL1Q5VV42 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 PGAM5P1-201ENST00000518923 814 ntBASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 AC040169.1-201ENST00000565382 521 ntBASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 C20orf181-201ENST00000623918 480 ntBASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKAL1Q5VV42 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKAL1Q5VV42 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms