Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 RNA5SP410-201ENST00000516285 106 ntBASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 AC061975.2-201ENST00000581722 295 ntBASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 CDC14C-201ENST00000428251 1719 ntBASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
KHDC1Q4VXA5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 SSR4P1-203ENST00000599569 2260 ntBASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 AC069262.1-201ENST00000539058 672 ntBASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 MIR4453-201ENST00000584019 89 ntBASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 MIR6080-201ENST00000617359 66 ntBASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KHDC1Q4VXA5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 LINC02447-202ENST00000501888 2146 ntBASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KHDC1Q4VXA5 AC018529.1-201ENST00000613063 361 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms